Conference Papers

  • Poisson Point Processes for Solving Stochastic Inverse Problems in Fluorescence Microscopy
    I. Smal, E. Meijering
    European Conference on Computer Vision (ECCV)
    (Amsterdam, October 8-16, 2015)
    Preprint
  • Automatic detection of Neurons in High-Content Microscope Images Using Machine Learning Approaches
    G. Mata, M. Radojevic, I. Smal, M. Morales, E. Meijering, J. Rubio
    IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI 2016)
    (Prague, Czech republic, April 13-16, 2016)
    Preprint
  • 3D Catheter Tip Tracking in 2D X-ray Image Sequences Using a Hidden Markov Model and 3D Rotational Angiography
    P. Ambrosini, I. Smal, D. Ruijters, W.J. Niessen, A. Moelker and T. van Walsum
    10th MICCAI Workshop on Augmented Environments for Computer-Assisted Interventions
    (Munich, Germany, October 5-9, 2015)
    Preprint
  • Automated Neuron Morphology Reconstruction using Fuzzy-Logic Detection and Bayesian Tracing Algorithms
    M. Radojevic, I. Smal, E. Meijering
    IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI 2015)
    (New York, USA, April 16 – 19, 2015)
    Preprint
  • Piecewise Constant Sequential Importance Sampling for Fast Particle Filtering
    O. Demirel, I. Smal, W. Niessen, E. Meijering, Ivo F. Sbalzarini
    Data Fusion & Target Tracking conference 2014
    (Liverpool, UK, April 29-30, 2014)
    Preprint  Abstract
  • PPF – A Parallel Particle Filtering Library
    O. Demirel, I. Smal, W. Niessen, E. Meijering, Ivo F. Sbalzarini
    Data Fusion & Target Tracking conference 2014
    (Liverpool, UK, April 29-30, 2014)
    Preprint  Abstract
  • Adaptive Distributed Resampling Algorithm with Non-Proportional Allocation
    O. Demirel, I. Smal, W. Niessen, E. Meijering, Ivo F. Sbalzarini
    IEEE International Conference on Acoustics, Speech, and Signal Processing (ICASSP 2014)
    (Florence, Italy, May 2-9, 2014)
    Preprint  Abstract
  • Fuzzy Logic Based Detection of Neuron Bifurcations in Microscopy Images
    M. Radojevic, I. Smal, W. Niessen, E. Meijering
    IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI 2014)
    (Beijing, China, April 29 – May 2, 2014)
    Preprint
  • Trans-Dimensional MCMC Methods for Fully Automatic Motion Analysis in Tagged MRI
    I. Smal, N. Carranza-Herrezuelo, S. Klein, W. Niessen and E. Meijering
    Medical Image Computing and Computer-Assisted Intervention – MICCAI 2011
    (Toronto, Canada, September 18-22, 2011), G. Fichtinger, A. Martel, and T. Peters (Eds.): MICCAI 2011, Part I, LNCS 6891, pp. 573–580. Springer, Heidelberg (2011)
    Preprint
  • Quantitative Comparison of Tracking Methods for Motion Analysis in Tagged MRI
    I. Smal, N. Carranza-Herrezuelo, S. Klein, W. J. Niessen, E. Meijering
    IEEE International Symposium on Biomedical Imaging: From Nano to Macro – ISBI 2011
    (Chicago, IL, USA, March 30 – April 2, 2011), IEEE, Piscataway, NJ, 2011
    Preprint
  • Automated Lineage Tree Reconstruction from Caenorhabditis Elegans Image Data using Particle Filtering Based Cell Tracking
    N. Carranza Herrezuelo, I. Smal, O. Dzyubachyk, W. J. Niessen, E. Meijering
    IEEE International Symposium on Biomedical Imaging: From Nano to Macro – ISBI 2011
    (Chicago, IL, USA, March 30 – April 2, 2011), IEEE, Piscataway, NJ, 2011
    Preprint
  • Particle Filtering Methods for Motion Analysis in Tagged MRI
    I. Smal, W. J. Niessen, E. Meijering
    IEEE International Symposium on Biomedical Imaging: From Nano to Macro – ISBI 2010
    (Rotterdam, NL, April 14-17, 2010), W. Niessen and E. Meijering (eds.), IEEE, Piscataway, NJ, 2010
    Preprint
  • Accurate Estimation of Microtubule Dynamics using Kymographs and Variable-Rate Particle Filters
    I. Smal, I. Grigoriev, A. Akhmanova, W. J. Niessen, E. Meijering
    Annual International Conference of the IEEE Engineering in Medicine and Biology Society – EMBC 2009
    (Minneapolis, MN, USA, September 2-6, 2009), B. He and Y. Kim (eds.), IEEE, Piscataway, NJ, 2009
    Preprint
  • Quantitative Comparison of Spot Detection Methods in Live-Cell Fluorescence Microscopy Imaging
    I. Smal, M. Loog, W. Niessen, E. Meijering
    IEEE International Symposium on Biomedical Imaging: From Nano to Macro – ISBI 2009
    (Boston, MA, USA, June 28 – July 1, 2009), W. C. Karl, B. Rosen, D. Brooks (eds.), IEEE, Piscataway, NJ, 2009
    Preprint
  • A New Detection Scheme for Multiple Object Tracking in Fluorescence Microscopy by Joint Probabilistic Data Association Filtering
    I. Smal, W. Niessen, E. Meijering
    IEEE International Symposium on Biomedical Imaging: From Nano to Macro – ISBI 2008
    (Paris, France, May 14-17, 2008), J.-C. Olivo-Marin, I. Bloch, A. Laine (eds.), IEEE, Piscataway, NJ, 2008, pp. 264-267
    Preprint
  • Bayesian Tracking of Tubular Structures and Its Application to Carotid Arteries in CTA
    M. Schaap, R. Manniesing, I. Smal, T. van Walsum, A. van der Lugt and W.J. Niessen
    Medical Image Computing and Computer-Assisted Intervention – MICCAI 2007
    (Brisbane, Australia, October 29-November 2, 2007), Lecture Notes in Computer Science, Springer-Verlag, Berlin, vol. 4791, 2007, pp. 562-570
    Preprint  Reprint
  • Rao-Blackwellized Marginal Particle Filtering for Multiple Object Tracking in Molecular Bioimaging
    I. Smal, K. Draegestein, N. Galjart, W. Niessen, E. Meijering
    Information Processing in Medical Imaging – IPMI 2007
    (Kerkrade, Limburg, The Netherlands, July 2-6, 2007), N. Karssemeijer and B. Lelieveldt (eds.), Lecture Notes in Computer Science, Springer-Verlag, Berlin, 2007, pp. 110-121
    Preprint
  • Bayesian Tracking of Elongated Structures in 3D Images
    M. Schaap, I. Smal, C. Metz, T. van Walsum and W.J. Niessen
    Information Processing in Medical Imaging – IPMI 2007
    (Kerkrade, Limburg, The Netherlands, July 2-6, 2007), N. Karssemeijer and B. Lelieveldt (eds.), Lecture Notes in Computer Science, Springer-Verlag, Berlin, 2007, pp. 74-85
    Preprint
  • Advanced Particle Filtering for Multiple Object Tracking in Dynamic Fluorescence Microscopy Images
    I. Smal, W. Niessen, E. Meijering
    Proceedings of the 2007 IEEE International Symposium on Biomedical Imaging: From Nano to Macro
    (Arlington, VA, USA, April 12-15, 2007), IEEE, Piscataway, NJ, 2007, pp. 1048-1051
    Preprint
  • Particle Filtering for Multiple Object Tracking in Molecular Cell Biology
    I. Smal, W. Niessen, E. Meijering
    Proceedings of the 2006 Nonlinear Statistical Signal Processing Workshop
    (Cambridge, UK, September 13-15, 2006), IEEE, Piscataway, NJ, 2006
    Preprint
  • Bayesian Tracking for Fluorescence Microscopic Imaging
    I. Smal, W. Niessen, E. Meijering
    Proceedings of the 2006 IEEE International Symposium on Biomedical Imaging: From Nano to Macro
    (Arlington, VA, USA, April 6-9, 2006), IEEE, Piscataway, NJ, 2006, pp. 550-553
    Preprint
  • Synthesis of Oscillators with One Degree of Freedom which Reproduce Oscillations with the Prescribed Waveform
    L. A. Sinitsky, I. Smal
    Proceeding of Third International Scientific Technical Conference “Mathematical Modeling in Electrical Engineering”
    Lviv, Ukraine, Oct. 25-30, 1999. pp.248-250
  • Synthesis of Relaxation Oscillators with the Prescribed Impulse Form
    I. Smal
    Proceeding of Third International Scientific Technical Conference “Mathematical Modeling in Electrical Engineering”
    Lviv, Ukraine, Oct. 25-30, 1999, pp. 255-257