- Automatic image registration of cerebral digital subtraction angiography
V. Hellebrekers, T. van Walsum, I. Smal , S.A.P. Cornelissen, W. van Zwam, A. van der Lugt, P.M. van der Sluijs, R. Su
The 14th International Conference on Information Processing in Computer-Assisted Interventions 20-21 June 2023 Munich, Germany
- Identification of diffusive states in tracking applications using unsupervised deep learning methods
H. Kabbech, I. Smal
IEEE International Symposium on Biomedical Imaging: From Nano to Macro – ISBI 2022 (International conference, held in Kolkata, India, March 28-31, 2022)
- Detection of replication forks in EM images using Faster R-CNN
W. Zhao, E.M. Manolia, A.R. Chaudhuri, I. Smal
IEEE International Symposium on Biomedical Imaging: From Nano to Macro – ISBI 2021 (International conference, held in Nice, France, April 13-16, 2021)
- Facilitating Data Association in Particle Track- ing using Autoencoding and Score Matching
I. Smal, N. Galjart, E. Meijering
IEEE International Symposium on Biomedical Imaging: From Nano to Macro – ISBI 2019 (International conference, held in Venice, Italy, April 8-11, 2019)
- Nerve Fiber Segmentation in Bright-Field Microscopy Images of Skin Biopsies Using Deep Learning
H. Bergwerf, M. Bechakra, I. Smal, J. Jongen, E. Meijering
IEEE International Symposium on Biomedical Imaging: From Nano to Macro – ISBI 2019 (International conference, held in Venice, Italy, April 8-11, 2019)
- Accurate Estimation of Intracellular Dynamics and Underlying Spatial Structures using Hierarchical Trajectory Smoothing
I. Smal, N. Galjart, and E. Meijering
IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI 2018) (Washington DC, USA, April 4-7, 2018)
Preprint
- Deep Neural Networks for Data Association in Particle Tracking
Y. Yao, I. Smal, and E. Meijering
IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI 2018)
(Washington DC, USA, April 4-7, 2018)
Preprint
- Gaussian Processes for Trajectory Analysis in Microtubule Tracking Applications
I. Smal, S. Basu, L. Sayas, N. Galjart, and E. Meijering
IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI 2017)
(Melbourne, Australia, April 18-21, 2017)
Preprint
- Poisson Point Processes for Solving Stochastic Inverse Problems in Fluorescence Microscopy
I. Smal, E. Meijering
European Conference on Computer Vision (ECCV)
(Amsterdam, October 8-16, 2015)
Preprint
- Automatic detection of Neurons in High-Content Microscope Images Using Machine Learning Approaches
G. Mata, M. Radojevic, I. Smal, M. Morales, E. Meijering, J. Rubio
IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI 2016)
(Prague, Czech republic, April 13-16, 2016)
Preprint
- 3D Catheter Tip Tracking in 2D X-ray Image Sequences Using a Hidden Markov Model and 3D Rotational Angiography
P. Ambrosini, I. Smal, D. Ruijters, W.J. Niessen, A. Moelker and T. van Walsum
10th MICCAI Workshop on Augmented Environments for Computer-Assisted Interventions
(Munich, Germany, October 5-9, 2015)
Preprint
- Automated Neuron Morphology Reconstruction using Fuzzy-Logic Detection and Bayesian Tracing Algorithms
M. Radojevic, I. Smal, E. Meijering
IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI 2015)
(New York, USA, April 16 – 19, 2015)
Preprint
- Piecewise Constant Sequential Importance Sampling for Fast Particle Filtering
O. Demirel, I. Smal, W. Niessen, E. Meijering, Ivo F. Sbalzarini
Data Fusion & Target Tracking conference 2014
(Liverpool, UK, April 29-30, 2014)
Preprint Abstract
- PPF – A Parallel Particle Filtering Library
O. Demirel, I. Smal, W. Niessen, E. Meijering, Ivo F. Sbalzarini
Data Fusion & Target Tracking conference 2014
(Liverpool, UK, April 29-30, 2014)
Preprint Abstract
- Adaptive Distributed Resampling Algorithm with Non-Proportional Allocation
O. Demirel, I. Smal, W. Niessen, E. Meijering, Ivo F. Sbalzarini
IEEE International Conference on Acoustics, Speech, and Signal Processing (ICASSP 2014)
(Florence, Italy, May 2-9, 2014)
Preprint Abstract
- Fuzzy Logic Based Detection of Neuron Bifurcations in Microscopy Images
M. Radojevic, I. Smal, W. Niessen, E. Meijering
IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI 2014)
(Beijing, China, April 29 – May 2, 2014)
Preprint
- Trans-Dimensional MCMC Methods for Fully Automatic Motion Analysis in Tagged MRI
I. Smal, N. Carranza-Herrezuelo, S. Klein, W. Niessen and E. Meijering
Medical Image Computing and Computer-Assisted Intervention – MICCAI 2011
(Toronto, Canada, September 18-22, 2011), G. Fichtinger, A. Martel, and T. Peters (Eds.): MICCAI 2011, Part I, LNCS 6891, pp. 573–580. Springer, Heidelberg (2011)
Preprint
- Quantitative Comparison of Tracking Methods for Motion Analysis in Tagged MRI
I. Smal, N. Carranza-Herrezuelo, S. Klein, W. J. Niessen, E. Meijering
IEEE International Symposium on Biomedical Imaging: From Nano to Macro – ISBI 2011
(Chicago, IL, USA, March 30 – April 2, 2011), IEEE, Piscataway, NJ, 2011
Preprint
- Automated Lineage Tree Reconstruction from Caenorhabditis Elegans Image Data using Particle Filtering Based Cell Tracking
N. Carranza Herrezuelo, I. Smal, O. Dzyubachyk, W. J. Niessen, E. Meijering
IEEE International Symposium on Biomedical Imaging: From Nano to Macro – ISBI 2011
(Chicago, IL, USA, March 30 – April 2, 2011), IEEE, Piscataway, NJ, 2011
Preprint
- Particle Filtering Methods for Motion Analysis in Tagged MRI
I. Smal, W. J. Niessen, E. Meijering
IEEE International Symposium on Biomedical Imaging: From Nano to Macro – ISBI 2010
(Rotterdam, NL, April 14-17, 2010), W. Niessen and E. Meijering (eds.), IEEE, Piscataway, NJ, 2010
Preprint
- Accurate Estimation of Microtubule Dynamics using Kymographs and Variable-Rate Particle Filters
I. Smal, I. Grigoriev, A. Akhmanova, W. J. Niessen, E. Meijering
Annual International Conference of the IEEE Engineering in Medicine and Biology Society – EMBC 2009
(Minneapolis, MN, USA, September 2-6, 2009), B. He and Y. Kim (eds.), IEEE, Piscataway, NJ, 2009
Preprint
- Quantitative Comparison of Spot Detection Methods in Live-Cell Fluorescence Microscopy Imaging
I. Smal, M. Loog, W. Niessen, E. Meijering
IEEE International Symposium on Biomedical Imaging: From Nano to Macro – ISBI 2009
(Boston, MA, USA, June 28 – July 1, 2009), W. C. Karl, B. Rosen, D. Brooks (eds.), IEEE, Piscataway, NJ, 2009
Preprint
- A New Detection Scheme for Multiple Object Tracking in Fluorescence Microscopy by Joint Probabilistic Data Association Filtering
I. Smal, W. Niessen, E. Meijering
IEEE International Symposium on Biomedical Imaging: From Nano to Macro – ISBI 2008
(Paris, France, May 14-17, 2008), J.-C. Olivo-Marin, I. Bloch, A. Laine (eds.), IEEE, Piscataway, NJ, 2008, pp. 264-267
Preprint
- Bayesian Tracking of Tubular Structures and Its Application to Carotid Arteries in CTA
M. Schaap, R. Manniesing, I. Smal, T. van Walsum, A. van der Lugt and W.J. Niessen
Medical Image Computing and Computer-Assisted Intervention – MICCAI 2007
(Brisbane, Australia, October 29-November 2, 2007), Lecture Notes in Computer Science, Springer-Verlag, Berlin, vol. 4791, 2007, pp. 562-570
Preprint Reprint
- Rao-Blackwellized Marginal Particle Filtering for Multiple Object Tracking in Molecular Bioimaging
I. Smal, K. Draegestein, N. Galjart, W. Niessen, E. Meijering
Information Processing in Medical Imaging – IPMI 2007
(Kerkrade, Limburg, The Netherlands, July 2-6, 2007), N. Karssemeijer and B. Lelieveldt (eds.), Lecture Notes in Computer Science, Springer-Verlag, Berlin, 2007, pp. 110-121
Preprint
- Bayesian Tracking of Elongated Structures in 3D Images
M. Schaap, I. Smal, C. Metz, T. van Walsum and W.J. Niessen
Information Processing in Medical Imaging – IPMI 2007
(Kerkrade, Limburg, The Netherlands, July 2-6, 2007), N. Karssemeijer and B. Lelieveldt (eds.), Lecture Notes in Computer Science, Springer-Verlag, Berlin, 2007, pp. 74-85
Preprint
- Advanced Particle Filtering for Multiple Object Tracking in Dynamic Fluorescence Microscopy Images
I. Smal, W. Niessen, E. Meijering
Proceedings of the 2007 IEEE International Symposium on Biomedical Imaging: From Nano to Macro
(Arlington, VA, USA, April 12-15, 2007), IEEE, Piscataway, NJ, 2007, pp. 1048-1051
Preprint
- Particle Filtering for Multiple Object Tracking in Molecular Cell Biology
I. Smal, W. Niessen, E. Meijering
Proceedings of the 2006 Nonlinear Statistical Signal Processing Workshop
(Cambridge, UK, September 13-15, 2006), IEEE, Piscataway, NJ, 2006
Preprint
- Bayesian Tracking for Fluorescence Microscopic Imaging
I. Smal, W. Niessen, E. Meijering
Proceedings of the 2006 IEEE International Symposium on Biomedical Imaging: From Nano to Macro
(Arlington, VA, USA, April 6-9, 2006), IEEE, Piscataway, NJ, 2006, pp. 550-553
Preprint
- Synthesis of Oscillators with One Degree of Freedom which Reproduce Oscillations with the Prescribed Waveform
L. A. Sinitsky, I. Smal
Proceeding of Third International Scientific Technical Conference “Mathematical Modeling in Electrical Engineering”
Lviv, Ukraine, Oct. 25-30, 1999. pp.248-250
- Synthesis of Relaxation Oscillators with the Prescribed Impulse Form
I. Smal
Proceeding of Third International Scientific Technical Conference “Mathematical Modeling in Electrical Engineering”
Lviv, Ukraine, Oct. 25-30, 1999, pp. 255-257
