Journal Papers

  • A Hidden Markov Model for 3D Catheter Tip Tracking with 2D X-ray Catheterization Sequence and 3D Rotational Angiography
    P. Ambrosini, I. Smal, D. Ruijters, W. J. Niessen, A. Moelker and T. van Walsum
    IEEE Transactions on Medical Imaging, 2016
    Reprint
  • Stochastic Optimization with Randomized Smoothing for Image Registration
    W. Sun, D. H. J. Poot, I. Smal, X. Yang, W.J. Niessen and S. Klein
    Medical Image Analysis, 6(35):146-158, 2016
    Reprint
  • Fuzzy-Logic Based Detection and Characterization of Junctions and Terminations in Fluorescence Microscopy Images of Neurons
    M. Radojevic, I. Smal, E. Meijering
    Neuroinformatics, 14(2):201-219, 2016
    Reprint
  • Marker-Less Stage Drift Correction in Super-Resolution Microscopy Using the Single-Cluster PHD Filter
    I. Schlangen, J. Franco, J. Houssineau, W. T. E. Pitkeathly, D. Clark, I. Smal, C. Rickman
    IEEE Journal on Selected Topics in Signal Processing, 10(1):193-202, 2016
    Reprint
  • Isolation of Functional Tubulin Dimers and of Tubulin-Associated Proteins from Mammalian Cells
    N. Yu, L. Signorile, S. Basu, S. Ottema, J. H. Lebbink, K. Leslie, I. Smal, D. Dekkers, J. Demmers, N. Galjart
    Current Biology, 26(13):1728-1736, 2016
    Reprint
  • Quantitative Comparison of Multiframe Data Association Techniques for Particle Tracking in Time-Lapse Fluorescence Microscopy
    I. Smal, E. Meijering
    Medical Image Analysis, 24(1):163-189, 2015
    Reprint
  • Quantitative Imaging of Focal Adhesion Dynamics and their Regulation by HGF and Rap1 Signaling
    E. Spanjaard, I. Smal, N. Angelopoulos, I. Verlaan, A. Matov, E. Meijering, L. Wessels, H. Bos, J. de Rooij
    Experimental Cell Research, 330(2):382-397, 2015
    Reprint
  • CLASP2-dependent Microtubule Capture at the Neuromuscular Junction Membrane Requires LL5β and Actin for Focal Delivery of Acetylcholine Receptor Vesicles
    S. Basu, S. Sladecek, I. Martinez de la Pena y Valenzuela, M. Akaaboune, I. Smal, K. Martin, N. Galjart, H.R. Brenner
    Molecular Biology of the Cell, 26(5):938-951, 2015
    Reprint
  • BRCA2 diffuses as oligomeric clusters with RAD51 and changes mobility after DNA damage in live cells
    M. Reuter, A. Zelensky, I. Smal, E. Meijering, W. A. van Cappellen, H. M. de Gruiter, G. J. van Belle, M. E. van Royen, A. B. Houtsmuller, J. Essers, R. Kanaar, C. Wyman
    Journal of Cell Biology, 207(5):599-613, 2014
    Reprint
  • Quantitative Imaging of Focal Adhesion Dynamics and their Regulation by HGF and Rap1 Signaling
    E. Spanjaard, I. Smal, N. Angelopoulos, I. Verlaan, A. Matov, E. Meijering, L. Wessels, H. Bos, J. de Rooij
    Experimental Cell Research, in press, 2014
    Reprint  Abstract
  • Objective Comparison of Particle Tracking Methods
    N. Chenouard, I. Smal, F. de Chaumont, M. Maska, I. F. Sbalzarini, Y. Gong, J. Cardinale, C. Carthel, S. Coraluppi, M. Winter, A. R. Cohen, W. J. Godinez, K. Rohr, Y. Kalaidzidis, L. Liang, J. Duncan, H. Shen, Y. Xu, K. E. G. Magnusson, J. Jalden, H. M. Blau, P. Paul-Gilloteaux, P. Roudot, C. Kervrann, F. Waharte, J. Y. Tinevez, S. L. Shorte, J. Willemse, K. Celler, G. P. van Wezel, H. W. Dan, Y. S. Tsai, C. Ortiz de Solorzano, J. C. Olivo-Marin, E. Meijering
    Nature Methods, 11(3):281-289, 2014
    Reprint  Abstract
  • End-Binding Proteins Sensitize Microtubules to the Action of Microtubule-Targeting Agents
    R. Mohan, E. A. Katrukha, H. Doodhi, I. Smal, E. Meijering, L. C. Kapitein, M. O. Steinmetz, A. Akhmanova
    Proceedings of the National Academy of Sciences of the United States of America, 110(22):8900-8905, May 2013
    Reprint  PubMed
  • Reversible Jump MCMC Methods for Fully Automatic Motion Analysis in Tagged MRI
    I. Smal, N. Carranza-Herrezuelo, S. Klein, P. Wielopolski, A. Moelker, T. Springeling, M. Bernsen, W. Niessen, E. Meijering
    Medical Image Analysis, 16(1):301-324, January 2012
    Preprint  Reprint
  • Insights into EB Structure and the Role of its C-terminal Domain in Discriminating Microtubule Tips from Lattice
    R. M. Buey, R. Mohan, K. Leslie, T. Walzthoeni, J. H. Missimer, A. Menzel, S. Bjelic, K. Bargsten, I. Grigoriev, I. Smal, E. Meijering, R. Aebersold, A. Akhmanova, M. O. Steinmetz
    Molecular Biology of the Cell, 22(16):2912-2923, July 2011
    Reprint  Reprint
  • Rab6, Rab8 and MICAL3 Cooperate in Controlling Docking and Fusion of Exocytotic Carriers
    I. Grigoriev, K. L. Yu, E. Martinez-Sanchez, A. Serra-Marques, I. Smal, E. Meijering, J. Demmers, J. Peränen, R. J. Pasterkamp, P. van der Sluijs, C. C. Hoogenraad, A. Akhmanova
    Current Biology, 21(11):967-974, May 2011
    Reprint  Preprint
  • In Vitro Reconstitution of the Functional Interplay between MCAK and EB3 at Microtubule Plus Ends
    S. Montenegro Gouveia, K. Leslie, L. C. Kapitein, R. M. Buey, I. Grigoriev, M. Wagenbach, I. Smal, E. Meijering, C. C. Hoogenraad, L. Wordeman, M. O. Steinmetz and A. Akhmanova
    Current Biology, 20(19):1717-1722, October 2010
    Reprint  Preprint
  • History-Dependent Catastrophes Regulate Axonal Microtubule Behaviour
    T. Stepanova, I. Smal, J. van Haren, U. Akinci, Z. Liu, M. Miedema, R. Limpens, M. van Ham, M. van der Reijden, R. Poot, F. Grosveld, M. Mommaas, E. Meijering, N. Galjart
    Current Biology, 20(11):1023-1028, May 2010
    Reprint  Preprint
  • Tracking in Cell and Developmental Biology
    E. Meijering, O. Dzyubachyk, I. Smal, W. A. van Cappellen
    Seminars in Cell and Developmental Biology, 20(8):894-902, October 2009
    Preprint  Reprint
  • Microtubule Dynamics Analysis Using Kymographs and Variable-Rate Particle Filters
    I. Smal, I. Grigoriev, A. Akhmanova, W. J. Niessen, E. Meijering
    IEEE Transactions on Image Processing, 19(7):1861-1876, July 2010
    Preprint  Reprint
  • Quantitative Comparison of Spot Detection Methods in Fluorescence Microscopy
    I. Smal, M. Loog, W. Niessen, E. Meijering
    IEEE Transactions on Medical Imaging, 29(2):282-301, February 2010
    Preprint  Reprint
  • Multiple Object Tracking in Molecular Bioimaging by Rao-Blackwellized Marginal Particle Filtering
    I. Smal, E. Meijering, K. Draegestein, N. Galjart, I. Grigoriev, A. Akhmanova, M. E. van Royen, A. B. Houtsmuller, W. Niessen
    Medical Image Analysis, 12(6):764-777, December 2008
    Preprint  Reprint
  • Particle Filtering for Multiple Object Tracking in Dynamic Fluorescence Microscopy Images: Application to Microtubule Growth Analysis
    I. Smal, K. Draegestein, N. Galjart, W. Niessen, E. Meijering
    IEEE Transactions on Medical Imaging, 27(6):789-804, June 2008
    Preprint  Reprint
  • Tracking in Molecular Bioimaging
    E. Meijering, I. Smal, G. Danuser
    IEEE Signal Processing Magazine, 23(3):46-53, May 2006
    Preprint  Reprint
  • Investigation of Subharmonic Oscillations in Ferroresonance Circuits
    I. Smal
    Technical Electrodynamics, 4:14-18, Kiev, Ukraine, 2001
    Preprint
  • Influence of the Approximation of the Magnetizing Curve on the Results of Calculations of the Ferroresonance in the RLC-circuit
    L. A. Sinitsky, I. Smal
    Digest of National Lviv University “Lvivska Politehnika”, 418:153-159, Lviv, Ukraine, 2001
  • Synthesis of Oscillators Reproducing one of the Solutions of Hamiltonian System
    L. A. Sinitsky,I. Smal
    Journal of Physical Studies, 4(1):1-5, Lviv, Ukraine, 2000
    Preprint
  • Synthesis of Oscillators of Relaxation Oscillations with prescribed Form of Impulses
    L. A. Sinitsky, I. Smal
    Electronics and Communication, 7:26-32, Kiev, Ukraine, 1999
    Preprint
  • On the Simulation of Oscillations of Given Form
    L. A. Sinitsky, I. Smal
    Engineering Simulation, 17:23-32, USA, 1999 (and reprinted in Electronic Modeling, 21(1):19-27, Kiev, Ukraine, 1999)
    Preprint